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2011


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Stochastic dynamics of bacteria propelled spherical micro-robots

Arabagi, V., Behkam, B., Sitti, M.

In Intelligent Robots and Systems (IROS), 2011 IEEE/RSJ International Conference on, pages: 3937-3942, 2011 (inproceedings)

pi

[BibTex]

2011


[BibTex]


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Control methodologies for a heterogeneous group of untethered magnetic micro-robots

Floyd, S., Diller, E., Pawashe, C., Sitti, M.

The International Journal of Robotics Research, 30(13):1553-1565, SAGE Publications, 2011 (article)

pi

[BibTex]

[BibTex]


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Efficient Multi-resolution Plane Segmentation of 3D Point Clouds

Oehler, B., Stueckler, J., Welle, J., Schulz, D., Behnke, S.

In Proc. of the Int. Conf. on Intelligent Robotics and Applications (ICIRA), 7102, pages: 145-156, Lecture Notes in Computer Science, Springer Berlin Heidelberg, 2011 (inproceedings)

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link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Computational flow studies in a subject-specific human upper airway using a one-equation turbulence model. Influence of the nasal cavity

Prihambodo Saksono, Perumal Nithiarasu, Igor Sazonov, Si Yong Yeo

International Journal for Numerical Methods in Biomedical Engineering, 87(1-5):96–114, 2011 (article)

Abstract
This paper focuses on the impact of including nasal cavity on airflow through a human upper respiratory tract. A computational study is carried out on a realistic geometry, reconstructed from CT scans of a subject. The geometry includes nasal cavity, pharynx, larynx, trachea and two generations of airway bifurcations below trachea. The unstructured mesh generation procedure is discussed in some length due to the complex nature of the nasal cavity structure and poor scan resolution normally available from hospitals. The fluid dynamic studies have been carried out on the geometry with and without the inclusion of the nasal cavity. The characteristic-based split scheme along with the one-equation Spalart–Allmaras turbulence model is used in its explicit form to obtain flow solutions at steady state. Results reveal that the exclusion of nasal cavity significantly influences the resulting solution. In particular, the location of recirculating flow in the trachea is dramatically different when the truncated geometry is used. In addition, we also address the differences in the solution due to imposed, equally distributed and proportionally distributed flow rates at inlets (both nares). The results show that the differences in flow pattern between the two inlet conditions are not confined to the nasal cavity and nasopharyngeal region, but they propagate down to the trachea.

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[BibTex]

[BibTex]


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Discrete Minimum Distortion Correspondence Problems for Non-rigid Shape Matching

Wang, C., Bronstein, M. M., Bronstein, A. M., Paragios, N.

In International Conference on Scale Space and Variational Methods in Computer Vision (SSVM), 2011 (inproceedings)

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pdf [BibTex]

pdf [BibTex]


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Viewpoint Invariant 3D Landmark Model Inference from Monocular 2D Images Using Higher-Order Priors

Wang, C., Zeng, Y., Simon, L., Kakadiaris, I., Samaras, D., Paragios, N.

In IEEE International Conference on Computer Vision (ICCV), 2011 (inproceedings)

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pdf [BibTex]

pdf [BibTex]


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Correspondence estimation from non-rigid motion information

Wulff, J., Lotz, T., Stehle, T., Aach, T., Chase, J. G.

In Proc. SPIE, (Editors: B. M. Dawant, D. R. Haynor), SPIE, Medical Imaging: Image Processing, 2011 (inproceedings)

Abstract
The DIET (Digital Image Elasto Tomography) system is a novel approach to screen for breast cancer using only optical imaging information of the surface of a vibrating breast. 3D tracking of skin surface motion without the requirement of external markers is desirable. A novel approach to establish point correspondences using pure skin images is presented here. Instead of the intensity, motion is used as the primary feature, which can be extracted using optical flow algorithms. Taking sequences of multiple frames into account, this motion information alone is accurate and unambiguous enough to allow for a 3D reconstruction of the breast surface. Two approaches, direct and probabilistic, for this correspondence estimation are presented here, suitable for different levels of calibration information accuracy. Reconstructions show that the results obtained using these methods are comparable in accuracy to marker-based methods while considerably increasing resolution. The presented method has high potential in optical tissue deformation and motion sensing.

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pdf link (url) DOI [BibTex]

pdf link (url) DOI [BibTex]


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Projected Newton-type methods in machine learning

Schmidt, M., Kim, D., Sra, S.

In Optimization for Machine Learning, pages: 305-330, MIT Press, Cambridge, MA, USA, 2011 (incollection)

Abstract
{We consider projected Newton-type methods for solving large-scale optimization problems arising in machine learning and related fields. We first introduce an algorithmic framework for projected Newton-type methods by reviewing a canonical projected (quasi-)Newton method. This method, while conceptually pleasing, has a high computation cost per iteration. Thus, we discuss two variants that are more scalable, namely, two-metric projection and inexact projection methods. Finally, we show how to apply the Newton-type framework to handle non-smooth objectives. Examples are provided throughout the chapter to illustrate machine learning applications of our framework.}

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link (url) [BibTex]

link (url) [BibTex]


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Study of krypton/xenon storage and separation in microporous frameworks

Soleimani Dorcheh, A.

Universität Darmstadt, Darmstadt, 2011 (mastersthesis)

mms

[BibTex]

[BibTex]


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Influence of dot size and annealing on the magnetic properties of large-area L10-FePt nanopatterns

Bublat, T., Goll, D.

{Journal of Applied Physics}, 110(7), 2011 (article)

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DOI [BibTex]


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The temperature-dependent magnetization profile across an epitaxial bilayer of ferromagnetic La2/3Ca1/3MnO3 and superconducting YBa2Cu3O7-δ

Brück, S., Treiber, S., Macke, S., Audehm, P., Christiani, G., Soltan, S., Habermeier, H., Goering, E., Albrecht, J.

{New Journal of Physics}, 13(3), 2011 (article)

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DOI [BibTex]

DOI [BibTex]


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Spin interactions in bcc and fcc Fe beyond the Heisenberg model

Singer, R., Dietermann, F., Fähnle, M.

{Physical Review Letters}, 107, 2011 (article)

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DOI [BibTex]

DOI [BibTex]


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Route to a family of robust, non-interpenetrated metal-organic frameworks with pto-like topology

Klein, N., Senkovska, I., Baburin, I. A., Grünker, R., Stoeck, U., Schlichtenmayer, M., Streppel, B., Mueller, U., Leoni, S., Hirscher, M., Kaskel, S.

{Chemistry - A European Journal}, 17(46):13007-13016, 2011 (article)

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DOI [BibTex]

DOI [BibTex]


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Initial stages of growth of iron on silicon for spin injection through Schottky barrier

Dash, S. P., Carstanjen, H. D.

{Physica Status Solidi B}, 248(10):2300-2304, 2011 (article)

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DOI [BibTex]

DOI [BibTex]


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Fe3O4/ZnO: A high-quality magnetic oxide-semiconductor heterostructure by reactive deposition

Paul, M., Kufer, D., Müller, A., Brück, S., Goering, E., Kamp, M., Verbeeck, J., Tian, H., Van Tendeloo, G., Ingle, N. J. C., Sing, M., Claessen, R.

{Applied Physics Letters}, 98, 2011 (article)

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DOI [BibTex]

DOI [BibTex]


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Influence of texture on the ferromagnetic properties of nanograined ZnO films

Straumal, B., Mazilkin, A., Protasova, S., Myatiev, A., Straumal, P., Goering, E., Baretzky, B.

{Physica Status Solidi B}, 248(7):1581-1586, 2011 (article)

mms

DOI [BibTex]

DOI [BibTex]


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Control of spin configuration in half-metallic La0.7Sr0.3MnO3 nano-structures

Rhensius, J., Vaz, C. A. F., Bisig, A., Schweitzer, S., Heidler, J., Körner, H. S., Locatelli, A., Niño, M. A., Weigand, M., Méchin, L., Gaucher, F., Goering, E., Heyderman, L. J., Kläui, M.

{Applied Physics Letters}, 99(6), 2011 (article)

mms

DOI [BibTex]

DOI [BibTex]


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Comparison of various sol-gel derived metal oxide layers for inverted organic solar cells

Oh, H., Krantz, J., Litzov, I., Stubhan, T., Pinna, L., Brabec, C. J.

{Solar Energy Materials \& Solar Cells}, 95(8):2194-2199, 2011 (article)

mms

DOI [BibTex]

DOI [BibTex]


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Predicting Articulated Human Motion from Spatial Processes

Soren Hauberg, Kim S. Pedersen

International Journal of Computer Vision, 94, pages: 317-334, Springer Netherlands, 2011 (article)

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Publishers site Code Paper site PDF [BibTex]

Publishers site Code Paper site PDF [BibTex]


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An Empirical Study on the Performance of Spectral Manifold Learning Techniques

Peter Mysling, Soren Hauberg, Kim S. Pedersen

In Artificial Neural Networks and Machine Learning – ICANN 2011, 6791, pages: 347-354, Lecture Notes in Computer Science, (Editors: Honkela, Timo and Duch, Włodzisław and Girolami, Mark and Kaski, Samuel), Springer Berlin Heidelberg, 2011 (inproceedings)

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Publishers site PDF [BibTex]

Publishers site PDF [BibTex]


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Separation of visual object features and grasp strategy in primate ventral premotor cortex

Vargas-Irwin, C., Franquemont, L., Black, M., Donoghue, J.

Neural Control of Movement, 21st Annual Conference, 2011 (conference)

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[BibTex]

[BibTex]

1999


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Some Aspects of Modelling Human Spatial Vision: Contrast Discrimination

Wichmann, F.

University of Oxford, University of Oxford, October 1999 (phdthesis)

ei

[BibTex]

1999


[BibTex]


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Engineering Support Vector Machine Kernels That Recognize Translation Initiation Sites in DNA

Zien, A., Rätsch, G., Mika, S., Schölkopf, B., Lemmen, C., Smola, A., Lengauer, T., Müller, K.

In German Conference on Bioinformatics (GCB 1999), October 1999 (inproceedings)

Abstract
In order to extract protein sequences from nucleotide sequences, it is an important step to recognize points from which regions encoding pro­ teins start, the so­called translation initiation sites (TIS). This can be modeled as a classification prob­ lem. We demonstrate the power of support vector machines (SVMs) for this task, and show how to suc­ cessfully incorporate biological prior knowledge by engineering an appropriate kernel function.

ei

Web [BibTex]

Web [BibTex]


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Unexpected and anticipated pain: identification of specific brain activations by correlation with reference functions derived form conditioning theory

Ploghaus, A., Clare, S., Wichmann, F., Tracey, I.

29, 29th Annual Meeting of the Society for Neuroscience (Neuroscience), October 1999 (poster)

ei

[BibTex]

[BibTex]


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Lernen mit Kernen: Support-Vektor-Methoden zur Analyse hochdimensionaler Daten

Schölkopf, B., Müller, K., Smola, A.

Informatik - Forschung und Entwicklung, 14(3):154-163, September 1999 (article)

Abstract
We describe recent developments and results of statistical learning theory. In the framework of learning from examples, two factors control generalization ability: explaining the training data by a learning machine of a suitable complexity. We describe kernel algorithms in feature spaces as elegant and efficient methods of realizing such machines. Examples thereof are Support Vector Machines (SVM) and Kernel PCA (Principal Component Analysis). More important than any individual example of a kernel algorithm, however, is the insight that any algorithm that can be cast in terms of dot products can be generalized to a nonlinear setting using kernels. Finally, we illustrate the significance of kernel algorithms by briefly describing industrial and academic applications, including ones where we obtained benchmark record results.

ei

PDF PDF DOI [BibTex]

PDF PDF DOI [BibTex]


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Input space versus feature space in kernel-based methods

Schölkopf, B., Mika, S., Burges, C., Knirsch, P., Müller, K., Rätsch, G., Smola, A.

IEEE Transactions On Neural Networks, 10(5):1000-1017, September 1999 (article)

Abstract
This paper collects some ideas targeted at advancing our understanding of the feature spaces associated with support vector (SV) kernel functions. We first discuss the geometry of feature space. In particular, we review what is known about the shape of the image of input space under the feature space map, and how this influences the capacity of SV methods. Following this, we describe how the metric governing the intrinsic geometry of the mapped surface can be computed in terms of the kernel, using the example of the class of inhomogeneous polynomial kernels, which are often used in SV pattern recognition. We then discuss the connection between feature space and input space by dealing with the question of how one can, given some vector in feature space, find a preimage (exact or approximate) in input space. We describe algorithms to tackle this issue, and show their utility in two applications of kernel methods. First, we use it to reduce the computational complexity of SV decision functions; second, we combine it with the kernel PCA algorithm, thereby constructing a nonlinear statistical denoising technique which is shown to perform well on real-world data.

ei

Web DOI [BibTex]

Web DOI [BibTex]


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Edges as outliers: Anisotropic smoothing using local image statistics

Black, M. J., Sapiro, G.

In Scale-Space Theories in Computer Vision, Second Int. Conf., Scale-Space ’99, pages: 259-270, LNCS 1682, Springer, Corfu, Greece, September 1999 (inproceedings)

Abstract
Edges are viewed as statistical outliers with respect to local image gradient magnitudes. Within local image regions we compute a robust statistical measure of the gradient variation and use this in an anisotropic diffusion framework to determine a spatially varying "edge-stopping" parameter σ. We show how to determine this parameter for two edge-stopping functions described in the literature (Perona-Malik and the Tukey biweight). Smoothing of the image is related the local texture and in regions of low texture, small gradient values may be treated as edges whereas in regions of high texture, large gradient magnitudes are necessary before an edge is preserved. Intuitively these results have similarities with human perceptual phenomena such as masking and "popout". Results are shown on a variety of standard images.

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pdf [BibTex]

pdf [BibTex]


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Probabilistic detection and tracking of motion discontinuities

(Marr Prize, Honorable Mention)

Black, M. J., Fleet, D. J.

In Int. Conf. on Computer Vision, ICCV-99, pages: 551-558, ICCV, Corfu, Greece, September 1999 (inproceedings)

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pdf [BibTex]

pdf [BibTex]


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p73 and p63 are homotetramers capable of weak heterotypic interactions with each other but not with p53.

Davison, T., Vagner, C., Kaghad, M., Ayed, A., Caput, D., CH, ..

Journal of Biological Chemistry, 274(26):18709-18714, June 1999 (article)

Abstract
Mutations in the p53 tumor suppressor gene are the most frequent genetic alterations found in human cancers. Recent identification of two human homologues of p53 has raised the prospect of functional interactions between family members via a conserved oligomerization domain. Here we report in vitro and in vivo analysis of homo- and hetero-oligomerization of p53 and its homologues, p63 and p73. The oligomerization domains of p63 and p73 can independently fold into stable homotetramers, as previously observed for p53. However, the oligomerization domain of p53 does not associate with that of either p73 or p63, even when p53 is in 15-fold excess. On the other hand, the oligomerization domains of p63 and p73 are able to weakly associate with one another in vitro. In vivo co-transfection assays of the ability of p53 and its homologues to activate reporter genes showed that a DNA-binding mutant of p53 was not able to act in a dominant negative manner over wild-type p73 or p63 but that a p73 mutant could inhibit the activity of wild-type p63. These data suggest that mutant p53 in cancer cells will not interact with endogenous or exogenous p63 or p73 via their respective oligomerization domains. It also establishes that the multiple isoforms of p63 as well as those of p73 are capable of interacting via their common oligomerization domain.

ei

Web [BibTex]

Web [BibTex]


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Shrinking the tube: a new support vector regression algorithm

Schölkopf, B., Bartlett, P., Smola, A., Williamson, R.

In Advances in Neural Information Processing Systems 11, pages: 330-336 , (Editors: MS Kearns and SA Solla and DA Cohn), MIT Press, Cambridge, MA, USA, 12th Annual Conference on Neural Information Processing Systems (NIPS), June 1999 (inproceedings)

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Semiparametric support vector and linear programming machines

Smola, A., Friess, T., Schölkopf, B.

In Advances in Neural Information Processing Systems 11, pages: 585-591 , (Editors: MS Kearns and SA Solla and DA Cohn), MIT Press, Cambridge, MA, USA, Twelfth Annual Conference on Neural Information Processing Systems (NIPS), June 1999 (inproceedings)

Abstract
Semiparametric models are useful tools in the case where domain knowledge exists about the function to be estimated or emphasis is put onto understandability of the model. We extend two learning algorithms - Support Vector machines and Linear Programming machines to this case and give experimental results for SV machines.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Kernel PCA and De-noising in feature spaces

Mika, S., Schölkopf, B., Smola, A., Müller, K., Scholz, M., Rätsch, G.

In Advances in Neural Information Processing Systems 11, pages: 536-542 , (Editors: MS Kearns and SA Solla and DA Cohn), MIT Press, Cambridge, MA, USA, 12th Annual Conference on Neural Information Processing Systems (NIPS), June 1999 (inproceedings)

Abstract
Kernel PCA as a nonlinear feature extractor has proven powerful as a preprocessing step for classification algorithms. But it can also be considered as a natural generalization of linear principal component analysis. This gives rise to the question how to use nonlinear features for data compression, reconstruction, and de-noising, applications common in linear PCA. This is a nontrivial task, as the results provided by kernel PCA live in some high dimensional feature space and need not have pre-images in input space. This work presents ideas for finding approximate pre-images, focusing on Gaussian kernels, and shows experimental results using these pre-images in data reconstruction and de-noising on toy examples as well as on real world data.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Kernel principal component analysis.

Schölkopf, B., Smola, A., Müller, K.

In Advances in Kernel Methods—Support Vector Learning, pages: 327-352, (Editors: B Schölkopf and CJC Burges and AJ Smola), MIT Press, Cambridge, MA, 1999 (inbook)

ei

[BibTex]

[BibTex]


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Estimating the support of a high-dimensional distribution

Schölkopf, B., Platt, J., Shawe-Taylor, J., Smola, A., Williamson, R.

(MSR-TR-99-87), Microsoft Research, 1999 (techreport)

ei

Web [BibTex]

Web [BibTex]


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Single-class Support Vector Machines

Schölkopf, B., Williamson, R., Smola, A., Shawe-Taylor, J.

Dagstuhl-Seminar on Unsupervised Learning, pages: 19-20, (Editors: J. Buhmann, W. Maass, H. Ritter and N. Tishby), 1999 (poster)

ei

[BibTex]

[BibTex]


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Spatial Learning and Localization in Animals: A Computational Model and Its Implications for Mobile Robots

Balakrishnan, K., Bousquet, O., Honavar, V.

Adaptive Behavior, 7(2):173-216, 1999 (article)

ei

[BibTex]

[BibTex]


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SVMs for Histogram Based Image Classification

Chapelle, O., Haffner, P., Vapnik, V.

IEEE Transactions on Neural Networks, (9), 1999 (article)

Abstract
Traditional classification approaches generalize poorly on image classification tasks, because of the high dimensionality of the feature space. This paper shows that Support Vector Machines (SVM) can generalize well on difficult image classification problems where the only features are high dimensional histograms. Heavy-tailed RBF kernels of the form $K(mathbf{x},mathbf{y})=e^{-rhosum_i |x_i^a-y_i^a|^{b}}$ with $aleq 1$ and $b leq 2$ are evaluated on the classification of images extracted from the Corel Stock Photo Collection and shown to far outperform traditional polynomial or Gaussian RBF kernels. Moreover, we observed that a simple remapping of the input $x_i rightarrow x_i^a$ improves the performance of linear SVMs to such an extend that it makes them, for this problem, a valid alternative to RBF kernels.

ei

GZIP [BibTex]

GZIP [BibTex]


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Classifying LEP data with support vector algorithms.

Vannerem, P., Müller, K., Smola, A., Schölkopf, B., Söldner-Rembold, S.

In Artificial Intelligence in High Energy Nuclear Physics 99, Artificial Intelligence in High Energy Nuclear Physics 99, 1999 (inproceedings)

ei

[BibTex]

[BibTex]


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Generalization Bounds via Eigenvalues of the Gram matrix

Schölkopf, B., Shawe-Taylor, J., Smola, A., Williamson, R.

(99-035), NeuroCOLT, 1999 (techreport)

ei

[BibTex]

[BibTex]


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Pedestal effects with periodic pulse trains

Henning, G., Wichmann, F.

Perception, 28, pages: S137, 1999 (poster)

Abstract
It is important to know for theoretical reasons how performance varies with stimulus contrast. But, for objects on CRT displays, retinal contrast is limited by the linear range of the display and the modulation transfer function of the eye. For example, with an 8 c/deg sinusoidal grating at 90% contrast, the contrast of the retinal image is barely 45%; more retinal contrast is required, however, to discriminate among theories of contrast discrimination (Wichmann, Henning and Ploghaus, 1998). The stimulus with the greatest contrast at any spatial-frequency component is a periodic pulse train which has 200% contrast at every harmonic. Such a waveform cannot, of course, be produced; the best we can do with our Mitsubishi display provides a contrast of 150% at an 8-c/deg fundamental thus producing a retinal image with about 75% contrast. The penalty of using this stimulus is that the 2nd harmonic of the retinal image also has high contrast (with an emmetropic eye, more than 60% of the contrast of the 8-c/deg fundamental ) and the mean luminance is not large (24.5 cd/m2 on our display). We have used standard 2-AFC experiments to measure the detectability of an 8-c/deg pulse train against the background of an identical pulse train of different contrasts. An unusually large improvement in detetectability was measured, the pedestal effect or "dipper," and the dipper was unusually broad. The implications of these results will be discussed.

ei

[BibTex]

[BibTex]


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Apprentissage Automatique et Simplicite

Bousquet, O.

Biologische Kybernetik, 1999, In french (diplomathesis)

ei

PostScript [BibTex]

PostScript [BibTex]


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Classification on proximity data with LP-machines

Graepel, T., Herbrich, R., Schölkopf, B., Smola, A., Bartlett, P., Müller, K., Obermayer, K., Williamson, R.

In Artificial Neural Networks, 1999. ICANN 99, 470, pages: 304-309, Conference Publications , IEEE, 9th International Conference on Artificial Neural Networks, 1999 (inproceedings)

ei

DOI [BibTex]

DOI [BibTex]


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Kernel-dependent support vector error bounds

Schölkopf, B., Shawe-Taylor, J., Smola, A., Williamson, R.

In Artificial Neural Networks, 1999. ICANN 99, 470, pages: 103-108 , Conference Publications , IEEE, 9th International Conference on Artificial Neural Networks, 1999 (inproceedings)

ei

DOI [BibTex]

DOI [BibTex]


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Linear programs for automatic accuracy control in regression

Smola, A., Schölkopf, B., Rätsch, G.

In Artificial Neural Networks, 1999. ICANN 99, 470, pages: 575-580 , Conference Publications , IEEE, 9th International Conference on Artificial Neural Networks, 1999 (inproceedings)

ei

DOI [BibTex]

DOI [BibTex]


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Regularized principal manifolds.

Smola, A., Williamson, R., Mika, S., Schölkopf, B.

In Lecture Notes in Artificial Intelligence, Vol. 1572, 1572, pages: 214-229 , Lecture Notes in Artificial Intelligence, (Editors: P Fischer and H-U Simon), Springer, Berlin, Germany, Computational Learning Theory: 4th European Conference, 1999 (inproceedings)

ei

[BibTex]

[BibTex]


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Entropy numbers, operators and support vector kernels.

Williamson, R., Smola, A., Schölkopf, B.

In Lecture Notes in Artificial Intelligence, Vol. 1572, 1572, pages: 285-299, Lecture Notes in Artificial Intelligence, (Editors: P Fischer and H-U Simon), Springer, Berlin, Germany, Computational Learning Theory: 4th European Conference, 1999 (inproceedings)

ei

[BibTex]

[BibTex]


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Sparse kernel feature analysis

Smola, A., Mangasarian, O., Schölkopf, B.

(99-04), Data Mining Institute, 1999, 24th Annual Conference of Gesellschaft f{\"u}r Klassifikation, University of Passau (techreport)

ei

PostScript [BibTex]

PostScript [BibTex]


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Machine Learning and Language Acquisition: A Model of Child’s Learning of Turkish Morphophonology

Altun, Y.

Middle East Technical University, Ankara, Turkey, 1999 (mastersthesis)

ei

[BibTex]

[BibTex]


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Is the Hippocampus a Kalman Filter?

Bousquet, O., Balakrishnan, K., Honavar, V.

In Proceedings of the Pacific Symposium on Biocomputing, 3, pages: 619-630, Proceedings of the Pacific Symposium on Biocomputing, 1999 (inproceedings)

ei

[BibTex]

[BibTex]